miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|67567857|gb|DR108502.1|DR108502 GAGCTCGGATCCACTAGTCCAGTGTGGTGGAATTCTGCAGATCCCTGCTGGAACAAATTCAAGATGGGAAGTTATCGCTA
ATTATATGAACATACACTCTTCTTCTGGAGTCAAGAGAACTGCCAAAGATGTTATTGGCAAAGCAAAGAGTCTTCAAAAA
CTTGACCCTCATCAAAAAGATGACATAAACAAAAAGGCTTTTGATAAATTTAAAAAAGAGCATGGAGTGGTGCCTCAAGC
CGACAATGCAACACCTTCAGAACGATTTGAAGGCCCATGCACAGATTTCACCCCTTGGACAACGGAAGAACAGAAGCTTT
TGGAACAGGCTTTAAAAACATACCCAGTAAATACACCTGAAAGATGGGAAAAAATAGCAGAAGCAGTGCCTGGCAGGACA
AAGAAGGACTGCATGAAGCGATATAAGGAACTTGTCGAGATGGTAAAAGCAAAGAAAGCTGCTCAAGAGCAAGTGCTGAA
TGCAAGTAGAGCCAAGAAATGACTTATGACAATCTTTGTTGTGTGTGCATTTTTATAATAAAACTGAAAATATTGTACAA
AAAAAAAAAAAAAAAAAAAGGGCGGCCGCTCGAGTCTAGAGGGCCCGTTTAAACCCGCTGATCAGCCTCGACTGTGCCTT
CTAGTTGCCAGCCATCTGTTGTTTGCCCCTCCCCCGTGCCTTCCTTGACCCTGGAAGGTGCCACTCCCACTGTCCTTTCC
TAATAAAATGAGGAAATTGCATCGCATTGTCT




Most similar to sp|Q1RMH9|DNJC2_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos
           taurus GN=DNAJC2 PE=2 SV=1
          Length = 621

 Score =  311 bits (796), Expect = 4e-84
 Identities = 151/152 (99%), Positives = 151/152 (99%)
 Frame = +2

Query: 44  PAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEH 223
           PAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEH
Sbjct: 470 PAGTNSRWEVIANYMNIHSSSGVKRTAKDVIGKAKSLQKLDPHQKDDINKKAFDKFKKEH 529

Query: 224 GVVPQADNATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTK 403
           GVVPQADNATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTK
Sbjct: 530 GVVPQADNATPSERFEGPCTDFTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTK 589

Query: 404 KDCMKRYKELVEMVKAKKAAQEQVLNASRAKK 499
           KDCMKRYKELVEMVKAKKAAQEQVLNASR KK
Sbjct: 590 KDCMKRYKELVEMVKAKKAAQEQVLNASRGKK 621